BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039F10LP1|AL430738
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1040 1895 0.0
>3x_Contig1040
Length = 3420
Score = 1895 bits (956), Expect = 0.0
Identities = 963/964 (99%), Gaps = 1/964 (0%)
Strand = Plus / Plus
Query: 1 gatcagatgttgacagttgatatcgtgctgaaattaccgaatatcaaaatttcaatgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gatcagatgttgacagttgatatcgtgctgaaattaccgaatatcaaaatttcaatgtta 709
Query: 61 ttatagcagtaagtagggaaaaaaaaaaattgaaaatgtttactatcgccaccttgaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ttatagcagtaagtagggaaaaaaaaaaattgaaaatgtttactatcgccaccttgaccg 769
Query: 121 tttttggctgtatctcctatttactgagaaataacgaccgaaataacgaccgaaacgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tttttggctgtatctcctatttactgagaaataacgaccgaaataacgaccgaaacgatg 829
Query: 181 agggagatagaacgagtgacaggagacgaagaaacagtgggtgagtagaagagaacgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 agggagatagaacgagtgacaggagacgaagaaacagtgggtgagtagaagagaacgtca 889
Query: 241 aatgtaatagatatagttaaaactctggggcgctctttagtcacgtgactgaaatttctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 aatgtaatagatatagttaaaactctggggcgctctttagtcacgtgactgaaatttctc 949
Query: 301 tttcttcactcaattactactacccgtcagtgtaggatagtcagagtacatagcaagcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 tttcttcactcaattactactacccgtcagtgtaggatagtcagagtacatagcaagcat 1009
Query: 361 caatgatttggagacagcaattgtcatcaggtgctctatgcaaagcggcttatataccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 caatgatttggagacagcaattgtcatcaggtgctctatgcaaagcggcttatataccaa 1069
Query: 421 atacctcaccacatcatagcatttctcgcatctctggctgcggcatcatagcccttctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 atacctcaccacatcatagcatttctcgcatctctggctgcggcatcatagcccttctgc 1129
Query: 481 ttttctttgttacgtcaactcttaatatacacacattctctatacttgataaaatgaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 ttttctttgttacgtcaactcttaatatacacacattctctatacttgataaaatgaaat 1189
Query: 541 atcaaacctttaaataaagatcagccttttaatatgataaaggttatataaaggaaacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 atcaaacctttaaataaagatcagccttttaatatgataaaggttatataaaggaaacag 1249
Query: 601 acaagaccaaagaattttcacaatgcagaacttcaattcccaagctgccatggatagaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 acaagaccaaagaattttcacaatgcagaacttcaattcccaagctgccatggatagaga 1309
Query: 661 gttttccccatcgatagtggggagtg-cccgcatacacccattagaatgaacagtataga 719
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1310 gttttccccatcgatagtggggagtgccccgcatacacccattagaatgaacagtataga 1369
Query: 720 agaagaagaagatgctatctcaccaccgtttctggcacagcaggattctgctattactgg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1370 agaagaagaagatgctatctcaccaccgtttctggcacagcaggattctgctattactgg 1429
Query: 780 cacaacggtgaattcgcccatgcacgttacaaaaccattggttttcagcacagagacacc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 cacaacggtgaattcgcccatgcacgttacaaaaccattggttttcagcacagagacacc 1489
Query: 840 accagggagaaggccgaattcgttttatagcgttcaaggcggaaacgattcttcaagttc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 accagggagaaggccgaattcgttttatagcgttcaaggcggaaacgattcttcaagttc 1549
Query: 900 gttagttgcaactaagggcttcactttcggtggtggaagcgataactctacaaatgatac 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1550 gttagttgcaactaagggcttcactttcggtggtggaagcgataactctacaaatgatac 1609
Query: 960 tcaa 963
||||
Sbjct: 1610 tcaa 1613
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,866
Number of Sequences: 1807
Number of extensions: 13866
Number of successful extensions: 291
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)